Likit Preeyanon
I’m a Ph.D. student at Michigan State University. I’m interested in bioinformatics, big data and programming. My research is focused on analyzing RNASeq data from the next-gen sequencing technology. In...
View ArticleClik here to view.
Basic text processing with Python built-in string methods with examples
Text processing is a common task in Bioinformatics. A Python string object has many built-in methods for manipulating texts. These methods can be used together to perform a complicated task such as...
View ArticleMCQs: Python text processing
Novices vs Practitioners Which of the following command will return “GL012″? s = ‘chrZ\t34500\t45000\tgeneid=GL012;transcriptID=0001;symbol=XVF’ s.split(‘=’)[2].split(‘;’)[0] s.replace(‘=’,...
View ArticleMotivating scientists to learn how to process text files with Python
Background Most scientific programs output results that can be saved in a plain text file in a variety of formats. With a large amount of input data, output files can be very large in size and number....
View ArticleScreencast: How to use Vim buffers
The screencast is about how to use Vim buffers to edit multiple files. This is my 3rd attempt. It’s quite hard to make the screencast for the first time. I had to learn how to use QuickTime for screen...
View Article